Combinatorial methods in chemistry and biochemistry
Mode of delivery, planned learning activities and teaching methods:
seminar – 2 hours weekly (on-site method)
Credits allocated:
2
Recommended semester:
Process Control – bachelor (full-time, attendance method), 4. semester
Level of study:
1.
Prerequisites for registration:
passed Mathematics I (N424M3_4B)
Assesment methods:
Learning outcomes of the course unit:
The student has skills in mathematical methods for calculating topological quantities of molecules and other discrete network structures. He/she has experience with methods and tools of real network analysis. He/she understands the interpretation of acquired concepts and knowledge in chemistry, biochemistry, genomics and proteomics.
Course contents:
Recommended or required reading:
Recommended:
J. Nosek a kol.:Genomika, CreateSpace, 2013
N. Trinajstić: Chemical Graph Theory, CRC Press, 1992 (2nd Edition)
P. E. C. Compeau a kol.: How to apply de Bruijn graphs to genome assembly, Nature Biotechnology, 29(11), 2011, 987-991